extmod/nimble: Override configuration options set in nimble_port_init.

This moves the runtime initialisation of `ble_hs_cfg` to happen after
`nimble_port_init()`. That is consistent with the order used in NimBLE
examples. On the ESP32 port this is needed because the ESP-IDF sets up
the default RAM secret store callbacks in its implementation of
`nimble_port_init()` (specifically, it calls `esp_nimble_init()` which
in turn calls `ble_store_ram_init()`). We want to override those with
our own callbacks to implement the `IRQ_[GS]ET_SECRET` events in Python.

Signed-off-by: Daniël van de Giessen <daniel@dvdgiessen.nl>

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